• National Cancer Institute
  • National Human Genome Research Institute

The Cancer Genome Atlas

Publications

All data generated by The Cancer Genome Atlas (TCGA) Research Network are made open to the public through the Data Coordinating Center and the TCGA Data Portal. The following is a growing list of publications from the TCGA Research Network (designated with an *) and from other investigators who have successfully leveraged the TCGA data for their own work.

All data generated by The Cancer Genome Atlas (TCGA) Research Network are made open to the public through the Data Coordinating Center and the TCGA Data Portal.

View Publications by Cancer Type


* = TCGA Research Network

  • Ur-Rehman, S., Gao, Q., Mitsopoulos, C. and Zvelebil, M. (2013) ROCK: A resource for integrative breast cancer data analysis. Breast Cancer Res Treat. doi: 10.1007/s10549-013-2593-z. View PubMed abstract
  • Kim, S.Y. and Speed, T.P. (2013) Comparing somatic mutation-callers: Beyond Venn diagrams. BMC Bioinformatics. 14:189. doi: 10.1186/1471-2105-14-189. View PubMed abstract
  • Meng, X., Cai, C., Wu, J., Cai, S., Ye, C., Chen, H., Yang, Z., Zeng, H., Shen, Q. and Zou, F. (2013) TRPM7 mediates breast cancer cell migration and invasion through the MAPK pathway. Cancer Lett. 333(1):96-102. View PubMed abstract
  • Myhre, S., Lingjærde, O.-C., Hennessy, B.T., Aure, M.R., Carey, M.S., Alsner, J., Tramm, T., Overgaard, J., Mills, G.B., Børresen-Dale, A.-L., et al. (2013) Influence of DNA copy number and mRNA levels on the expression of breast cancer related proteins. Mol Oncol. 7(3):704-718. View PubMed abstract
  • Swartling, F.J., Hede, S.M. and Weiss, W.A. (2013) What underlies the diversity of brain tumors?. Cancer Metastasis Rev. 32(1-2):5-24. View PubMed abstract
  • Ward, K.K., Tancioni, I., Lawson, C., Miller, N.L., Jean, C., Chen, X.L., Uryu, S., Kim, J., Tarin, D., Stupack, D.G., et al. (2013) Inhibition of focal adhesion kinase (FAK) activity prevents anchorage-independent ovarian carcinoma cell growth and tumor progression. Clin Exp Metastasis. 30(5):579-594. View PubMed abstract
  • Zhang, X.-Q., Sun, S., Lam, K.-F., Kiang, K.M.-Y., Pu, J.K.-S., Ho, A.S.-W., Lui, W.-M., Fung, C.-F., Wong, T.-S. and Leung, G.K.-K. (2013) A long non-coding RNA signature in glioblastoma multiforme predicts survival. Neurobiol Dis. doi: 10.1016/j.nbd.2013.05.011. View PubMed abstract
  • Martinez, P., Birkbak, N.J., Gerlinger, M., McGranahan, N., Burrell, R., Rowan, A., Joshi, T., Fisher, R., Larkin, J., Szallasi, Z., et al. (2013) Parallel evolution of tumor subclones mimics diversity between tumors. J Pathol. doi: 10.1002/path.4214. View PubMed abstract
  • Rachidi, S.M., Qin, T., Sun, S., Zheng, W.J. and Li, Z. (2013) Molecular profiling of multiple human cancers defines an inflammatory cancer-associated molecular pattern and uncovers KPNA2 as a uniform poor prognostic cancer marker. PLoS One. 8(3):e57911. Read the full article
  • Colak, D., Nofal, A., Albakheet, A., Nirmal, M., Jeprel, H., Eldali, A., Al-Tweigeri, T., Tulbah, A., Ajarim, D., Malik, O.A., et al. (2013) Age-specific gene expression signatures for breast tumors and cross-species conserved potential cancer progression markers in young women. PLoS One. 8(5):e63204. Read the full article
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